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lipid_clustering [2019/08/23 13:44] editlipid_clustering [2022/11/07 08:46] (current) admin
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 Copy the script folder provided in the path above to your path. Copy the script folder provided in the path above to your path.
 +
 +If on ZT1, please use the files in the following directory: /afs/shell.umd.edu/project/energybio/shared/jbklauda/scripts/cluster_mult_lip/
  
 =====Cluster Prep===== =====Cluster Prep=====
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 1.1 Update the path of psf and crd files in **rtfpsf.str**  1.1 Update the path of psf and crd files in **rtfpsf.str** 
  
-1.2 Update the path of **step5_assembly.str**, **crystal_image.str**, and dcd files in **coord-a.inp** and **coord-b.inp**+1.2 Update the path of **step5_assembly.str**, **crystal_image.str**, **dcd files** and **number of frames per dcd** in **coord-a.inp** and **coord-b.inp**
  
 1.3 Update the lipid names and head group names, and number of types of three groups of lipids in the **def_nlip_a.str** and **def_nlip_b.str**. 1.3 Update the lipid names and head group names, and number of types of three groups of lipids in the **def_nlip_a.str** and **def_nlip_b.str**.
lipid_clustering.1566582262.txt.gz · Last modified: 2019/08/23 13:44 by edit