Differences

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--- asymmetric_bilayer [2022/09/02 09:55] – [Step 2: Generate a bilayer] edit
+++ asymmetric_bilayer [2026/03/04 00:09] (current) – [Package and operation] edit
@@ Line 5: / Line 5: @@
 Created by Dr. Min-Kang Hsieh \\
 Contact email: mkhsieh1027@gmail.com \\
+**Update (02.15.2026):**\\
+The update (asym_memb_builder_v5.tgz) reflects the corresponding modification of ion residue names in IONS, replacing the POT and CAL resnames. In Step 6, phosphorus atoms are constrained in step5_input.ref following CHARMM minimization. Using the helper file (./namd/membrane_lipid_phos_restraint.namd.str), users can modify the constraint settings as needed.
 **Update (08.24.2022):**\\
@@ Line 22: / Line 25: @@
 /lustre/mhsieh/asym_memb/asym_memb_builder_v5.beta \\
 /lustre/mhsieh/asym_memb/asym_memb_builder_v4_prot \\
-or download the package through the link {{ :asym_memb_builder_v4.tgz |}} {{ :asym_memb_builder_v5.beta.tgz |}}\\
+or download the package through the link {{ :asym_memb_builder_v4.tgz |}} {{ :asym_memb_builder_v5.beta.tgz |}}  {{ :asym_memb_builder_v5.1.tgz |}}\\
 Authors: Min-Kang Hsieh and Jeffery B. Klauda \\
 \\