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By Robert Allsopp as of 8/26/2021

The newly update scripts for running NAMD on Rockfish rockfish_namd_run.tgz (by Min-Kang Hsieh)

This is a bash script so it is easily transferable to other machines.

There is only a cpu script for now as of 8/26/2021

The files can be found in the location of: /data/jbklauda/rallsopp/production_run_files

Alternatively it can also be downloaded here: m4.tar.gz

individual_files.tar.gz

Updates were made to some files here.

rockfish.tar

This is the updated dyn.sh file to avoid the NAMD crashes dyn.tar

I'm using the scr16 file space and there is a deletion policy so need to transfer files back.

Look at the dyn.sh, dyn.scr first-dyn.csh.

rockfish.1659455627.txt.gz · Last modified: 2022/08/02 11:53 by edit